STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0000_0649Carboxypeptidase; Belongs to the peptidase S10 family. (465 aa)    
Predicted Functional Partners:
Cys-2
Cathepsin L-like proteinase; Belongs to the peptidase C1 family.
   
 0.719
cysteine
Cathepsin-like proteinase; Belongs to the peptidase C1 family.
   
 0.666
Esi_0133_0078
Aspartyl protease; Belongs to the peptidase A1 family.
   
 0.629
ASP
Aspartyl protease; Belongs to the peptidase A1 family.
   
 0.629
Esi_0018_0069
Aspartyl protease; Belongs to the peptidase A1 family.
   
 0.629
Esi_0039_0092
Pepsinogen; Belongs to the peptidase A1 family.
   
 0.629
Esi_0529_0003
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.629
Esi_0157_0030
RNA binding protein.
   
 0.629
Esi_0024_0169
Aspartic protease PM5; Belongs to the peptidase A1 family.
   
 0.629
Esi_0077_0092
Pepsinogen; Belongs to the peptidase A1 family.
   
 0.629
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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