STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0100_0043Peptidylprolyl isomerase. (543 aa)    
Predicted Functional Partners:
Esi_0301_0005
CS domain-containing protein.
   
 0.694
HSP2
Heat shock protein 90.
   
 0.666
Hsp-11
Heat shock protein Hsp90.
   
 0.666
HSP1
Heat shock protein 90.
   
 0.666
Hsp-25
Heat shock protein 90.
   
 0.634
Esi_0138_0011
Brix domain containing 1.
   
   0.572
Esi_0127_0070
Uncharacterized protein.
    
 0.538
SGT1-like
SGT1 homologue.
   
 0.506
Esi_0073_0055
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.501
Esi_0029_0119
annotation not available
    
 0.481
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.