STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0100_0048Xylosyltransferase, family GT14. (312 aa)    
Predicted Functional Partners:
B4GALT3
Beta-1,4-galactosyltransferase, family GT7.
    
 0.576
FucT
Alpha-(1,3)-fucosyltransferase, family GT10.
     
 0.518
Sphk
Sphingosine kinase.
     
 0.512
Esi_0046_0071
Similar to F59G1.4.
     
 0.471
Esi_0046_0072
Uncharacterized protein.
     
 0.471
Esi_0140_0010
Uncharacterized protein.
    
  0.438
Esi_0140_0013
Uncharacterized protein.
    
  0.438
Esi_0140_0015
Uncharacterized protein.
    
  0.438
Esi_0140_0034
WSC domain-containing protein.
    
  0.438
Esi_0227_0010
Uncharacterized protein.
    
  0.438
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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