STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0113_0047SAM-dependent methyltransferases. (422 aa)    
Predicted Functional Partners:
Esi_0638_0003
Uncharacterized protein.
   
 0.756
CAS
Cycloartenol synthase.
   
 0.717
CAS-2
Cycloartenol synthase.
   
 0.717
STE1
Sterol C-5 desaturase; Belongs to the sterol desaturase family.
   
 0.697
Esi_0048_0104
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.697
Esi_0358_0006
Serine/threonine kinase, putative.
   
  0.660
Esi_0155_0005
Protein kinase domain containing protein.
   
  0.660
Esi_0538_0010
annotation not available
   
  0.660
IDI1
annotation not available
   
 0.646
PSY
Phytoene synthase chloroplast.
   
 0.646
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.