STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0121_0014FYVE-type domain-containing protein. (232 aa)    
Predicted Functional Partners:
TIC
CHloroplast inner membrane protein TIC 21.
    
 0.613
Esi_0051_0120
Uncharacterized protein.
    
 0.613
Esi_0188_0057
Uncharacterized protein.
   
 0.599
Esi_0188_0058
Uncharacterized protein.
   
 0.599
ARL8
ARL8, ARF-like Ras superfamily GTPase; Belongs to the small GTPase superfamily. Arf family.
    
 0.567
Phb2
Prohibitin.
    
  0.562
Rab8D
Rab8D, RAB family GTPase.
    
  0.557
Rab8B
Rab8B, RAB family GTPase.
    
  0.557
Rab8C
Rab8C, RAB family GTPase.
    
  0.557
Rab8A
Rab8A, RAB family GTPase.
    
  0.557
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.