STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0126_0037Uncharacterized protein. (1254 aa)    
Predicted Functional Partners:
RTW
RTW, Ras superfamily GTPase.
   
 0.618
Rab11B
Rab11B, RAB family GTPase.
   
 0.618
Rab11D
Rab11D, RAB family GTPase.
   
 0.618
Rab11C
Rab11C, RAB family GTPase.
   
 0.618
Rab11A
Rab11A, RAB family GTPase.
   
 0.618
ARP3
Actin-related protein 2/3 complex subunit 3; Belongs to the actin family.
   
  0.595
ARP2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
  0.589
Esi_0002_0184
Hypothetical leucine rich repeat protein.
    
   0.560
Esi_0000_0141
Miro-related GTP-ase 1.
    
  0.516
Esi_0044_0089
Uncharacterized protein.
    
  0.516
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.