STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0129_0055RibD_C domain-containing protein. (258 aa)    
Predicted Functional Partners:
Esi_0098_0007
Pribosyltran domain-containing protein.
  
 0.818
Esi_0308_0007
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 0.809
ALG13
Beta(1,4)-N-acetylglucosaminyltransferase.
    
 0.801
Esi_0079_0076
Uncharacterized protein.
  
 
 0.785
Adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.753
Esi_0138_0072
Uncharacterized protein.
  
 
 0.751
Esi_0024_0099
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.726
Esi_0226_0037
PNP_UDP_1 domain-containing protein.
   
 0.721
RPI
Ribose-5-phosphate isomerase.
    
 0.718
Esi_0038_0110
Inosine-adenosine-guanosine-nucleoside hydrolase.
  
 
 0.714
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.