STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGKPhosphoglycerate kinase. (485 aa)    
Predicted Functional Partners:
TPI-2
Triosephosphate isomerase.
 
 0.982
TPI
Triosephosphate isomerase.
 
 0.965
GAP-2
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.899
GAP-3
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.898
Esi_0006_0075
Phosphoglycerate mutase.
   
 0.875
Esi_0079_0076
Uncharacterized protein.
  
 0.862
Esi_0004_0252
TPR_REGION domain-containing protein.
  
 
 0.835
Esi_0626_0005
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.834
Esi_0060_0128
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.834
Esi_0138_0072
Uncharacterized protein.
  
 0.832
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.