STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0014_0098Uncharacterized protein. (635 aa)    
Predicted Functional Partners:
rpl18
50S ribosomal protein L18, chloroplastic; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit.
   
  0.482
Esi_0149_0069
Belongs to the peptidase C19 family.
   
  0.482
Esi_0207_0016
Uncharacterized protein.
   
  0.482
Esi_0234_0001
Uncharacterized protein.
   
  0.482
Esi_0032_0131
DUSP domain-containing protein.
   
  0.482
Esi_0042_0114
Similar to ubiquitin specific peptidase 15; Belongs to the peptidase C19 family.
   
  0.482
Esi_0752_0005
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  0.482
Esi_0878_0002
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  0.482
Esi_0168_0074
MYND-type domain-containing protein.
   
  0.482
Esi_0062_0080
Uncharacterized protein; Belongs to the peptidase C19 family.
   
  0.482
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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