Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Esi_0000_0053 | Esi_0010_0112 | D8LAV8 | D8LC14 | Uncharacterized protein. | RF_PROK_I domain-containing protein. | 0.933 |
Esi_0000_0053 | Esi_0149_0012 | D8LAV8 | D7FKT9 | Uncharacterized protein. | Tim44 domain-containing protein. | 0.954 |
Esi_0000_0053 | Esi_0152_0057 | D8LAV8 | D8LFY0 | Uncharacterized protein. | Threonine--tRNA ligase. | 0.863 |
Esi_0000_0053 | Esi_0441_0012 | D8LAV8 | D7G183 | Uncharacterized protein. | Ribosomal_L18e/L15P domain-containing protein. | 0.954 |
Esi_0000_0053 | PRP | D8LAV8 | D7FKW4 | Uncharacterized protein. | Chloroplast 50S ribosomal protein L15. | 0.954 |
Esi_0000_0053 | rpl1 | D8LAV8 | D1J715 | Uncharacterized protein. | 50S ribosomal protein L1, chloroplastic; Binds directly to 23S rRNA. Might be involved in E site tRNA release. | 0.943 |
Esi_0000_0053 | rpl27 | D8LAV8 | D1J768 | Uncharacterized protein. | 50S ribosomal protein L27, chloroplastic. | 0.985 |
Esi_0000_0053 | rps12 | D8LAV8 | D1J727 | Uncharacterized protein. | 30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. | 0.986 |
Esi_0000_0053 | rps14 | D8LAV8 | D1J7A5 | Uncharacterized protein. | 30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. | 0.972 |
Esi_0010_0112 | Esi_0000_0053 | D8LC14 | D8LAV8 | RF_PROK_I domain-containing protein. | Uncharacterized protein. | 0.933 |
Esi_0010_0112 | Esi_0149_0012 | D8LC14 | D7FKT9 | RF_PROK_I domain-containing protein. | Tim44 domain-containing protein. | 0.931 |
Esi_0010_0112 | Esi_0152_0057 | D8LC14 | D8LFY0 | RF_PROK_I domain-containing protein. | Threonine--tRNA ligase. | 0.885 |
Esi_0010_0112 | Esi_0441_0012 | D8LC14 | D7G183 | RF_PROK_I domain-containing protein. | Ribosomal_L18e/L15P domain-containing protein. | 0.921 |
Esi_0010_0112 | PRP | D8LC14 | D7FKW4 | RF_PROK_I domain-containing protein. | Chloroplast 50S ribosomal protein L15. | 0.921 |
Esi_0010_0112 | rpl1 | D8LC14 | D1J715 | RF_PROK_I domain-containing protein. | 50S ribosomal protein L1, chloroplastic; Binds directly to 23S rRNA. Might be involved in E site tRNA release. | 0.932 |
Esi_0010_0112 | rpl27 | D8LC14 | D1J768 | RF_PROK_I domain-containing protein. | 50S ribosomal protein L27, chloroplastic. | 0.995 |
Esi_0010_0112 | rps12 | D8LC14 | D1J727 | RF_PROK_I domain-containing protein. | 30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. | 0.965 |
Esi_0010_0112 | rps14 | D8LC14 | D1J7A5 | RF_PROK_I domain-containing protein. | 30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. | 0.961 |
Esi_0142_0038 | Esi_0152_0057 | D7FK87 | D8LFY0 | Similar to Tyrosyl-tRNA synthetase, cytoplasmic (Tyrosyl--tRNA ligase) (TyrRS). | Threonine--tRNA ligase. | 0.881 |
Esi_0142_0038 | rpl1 | D7FK87 | D1J715 | Similar to Tyrosyl-tRNA synthetase, cytoplasmic (Tyrosyl--tRNA ligase) (TyrRS). | 50S ribosomal protein L1, chloroplastic; Binds directly to 23S rRNA. Might be involved in E site tRNA release. | 0.512 |
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