STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0206_0003Nuclear cap-binding protein subunit 2. (196 aa)    
Predicted Functional Partners:
Esi_0155_0015
Uncharacterized protein.
   
 0.999
Esi_0289_0007
C2H2-type domain-containing protein.
    
 0.993
Esi_0189_0043
RNA-binding protein, putative.
   
 0.992
SmE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.991
SmG
Small nuclear ribonucleoprotein G.
   
 0.989
SmF
Small nuclear ribonucleoprotein SmF.
   
  0.988
SmD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.986
SmB
Small nuclear ribonucleoprotein-associated protein.
    
 0.985
Esi_0073_0086
RanBD1 domain-containing protein.
   
 0.985
HBP
Histone hairpin binding protein.
   
 
 0.983
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.