STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0023_0071Similar polyubiquitin. (178 aa)    
Predicted Functional Partners:
Esi_0057_0068
RING-type domain-containing protein.
   
 0.998
Esi_0049_0105
JAB_MPN domain-containing protein.
    
 0.996
Esi_0017_0158
Survivin.
   
 0.995
Esi_0229_0023
UBX domain-containing protein.
    
 0.995
Esi_0399_0017
Uncharacterized protein.
   
 0.995
Esi_0000_0354
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.995
Esi_0081_0072
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.995
Esi_0243_0031
N_BRCA1_IG domain-containing protein.
   
 0.991
Esi_0015_0112
N_BRCA1_IG domain-containing protein.
   
 0.991
Esi_0185_0042
DEAD box helicase similar to CG7922-PA.
   
 0.989
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.