STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0023_0134Oligopeptidase A. (69 aa)    
Predicted Functional Partners:
Esi_0125_0083
Carbonic anhydrase.
     
 0.558
Esi_0590_0004
Alpha/beta hydrolase fold domain protein.
     
 0.558
Esi_0011_0163
Gamma carbonic anhydrase.
     
 0.558
NDA-6
NADH dehydrogenase (Ubiquinone).
     
 0.558
Esi_0174_0029
Putative carbonic anhydrase.
     
 0.558
Prd1
Oligopeptidase A (Partial).
  
     0.516
Esi_0020_0043
Uncharacterized protein.
   
 
 0.431
HSP2
Heat shock protein 90.
  
  
 0.418
Hsp-11
Heat shock protein Hsp90.
  
  
 0.418
HSP1
Heat shock protein 90.
  
  
 0.418
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.