STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0283_0033Uncharacterized protein; Belongs to the peptidase M18 family. (454 aa)    
Predicted Functional Partners:
Atg8
Autophagy-related protein.
   
 
 0.722
Atg9
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.622
Esi_0151_0057
TFIIH subunit (Partial).
    
   0.517
Esi_0056_0037
Uncharacterized protein.
      0.481
Esi_0233_0021
Uncharacterized protein.
 
    
 0.432
Esi_0006_0178
Carboxylase.
 
      0.422
EIF2A
Eukaryotic initiation factor 2A.
    
 
 0.408
Esi_0243_0031
N_BRCA1_IG domain-containing protein.
    
 
 0.405
Esi_0057_0068
RING-type domain-containing protein.
    
 
 0.405
Esi_0015_0112
N_BRCA1_IG domain-containing protein.
    
 
 0.405
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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