STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0304_0029Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
Esi_0104_0061
Uncharacterized protein.
   
 0.716
Esi_0162_0059
Similar to voltage-dependent calcium channel T-type alpha 1I subunit.
   
 0.716
Esi_0180_0048
Calcium channel.
   
 0.716
Esi_0021_0051
Voltage-gated Ion Channel (VIC) Superfamily.
   
 0.716
Esi_0234_0036
Uncharacterized protein.
   
 0.716
Esi_0234_0043
Ion_trans domain-containing protein.
   
 0.716
Esi_0029_0129
Voltage Gated Calcium/Sodium Channel subunit alpha.
   
0.716
Esi_0015_0142
Similar to two-pore calcium channel [Arabidopsis thaliana].
   
 0.716
Esi_0206_0044
Similar to sodium channel, voltage-gated, type IX, alpha isoform 5.
   
 0.716
Esi_0206_0045
Ion_trans domain-containing protein.
   
 0.716
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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