STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0031_0054Coiled-coil domain-containing protein 94. (446 aa)    
Predicted Functional Partners:
Esi_0089_0051
Uncharacterized protein.
    
   0.970
Esi_0399_0012
WD_REPEATS_REGION domain-containing protein.
    
   0.969
Snu114
Snu114, GTPase of the U5 snRNP particle.
    
   0.968
Esi_1122_0001
HTH myb-type domain-containing protein.
    
   0.887
Esi_0248_0012
Myb_Cef domain-containing protein.
    
   0.887
Esi_0248_0013
Cell division cycle 5-like.
    
   0.887
Mef1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
    
   0.578
EF2
EF2, translation elongation factor 2.
    
   0.578
Ria1
Ria1, cytoplasmic GTPase involved in biogenesis of the 60S ribosome.
    
   0.578
PRF3
PRF3, plastid translation release factor RF3.
    
   0.578
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.