STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0038_0109Aa_trans domain-containing protein. (439 aa)    
Predicted Functional Partners:
GTR1
GTR1, Ras superfamily GTPase.
   
 0.702
GTR2
GTR2, Ras superfamily GTPase.
    
 0.664
Esi_0003_0328
Ankyrin, TRAF-type zinc finger protein.
    
  0.589
Esi_0459_0002
Uncharacterized protein.
    
  0.589
Esi_0053_0001
Uncharacterized protein.
    
  0.589
Esi_0105_0052
EsV-1-7.
    
  0.552
Esi_0244_0015
EsV-1-7.
    
  0.552
Esi_0270_0045
EsV-1-7.
    
  0.552
Esi_0282_0026
EsV-1-7.
    
  0.552
Esi_0362_0019
EsV-1-7.
    
  0.552
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.