STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0422_0017WD_REPEATS_REGION domain-containing protein. (545 aa)    
Predicted Functional Partners:
Esi_0110_0046
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.935
Esi_0073_0055
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.931
Esi_0324_0024
Similar to WD repeat domain 36.
   
 
 0.929
Esi_0084_0012
Nucleolar complex associated 2 homolog.
   
 
 0.908
Esi_0137_0073
Uncharacterized protein.
   
 
 0.908
Esi_0218_0022
rRNA biogenesis protein rrp5.
   
 
 0.904
Esi_0179_0060
DEAD box helicase.
   
 
 0.896
Esi_0063_0122
Uncharacterized protein.
   
 
 0.892
Esi_0101_0047
Uncharacterized protein.
   
   0.888
Esi_0138_0011
Brix domain containing 1.
   
  
 0.886
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.