STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFfhPFfh, plastid Ffh subunit of the signal recognition particle. (557 aa)    
Predicted Functional Partners:
Esi_0141_0017
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.986
Esi_0030_0134
Uncharacterized protein.
   
 0.986
Esi_0130_0029
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.980
SRP101
SRP101, alpha subunit of the signal recognition particle receptor.
 
0.935
Esi_0184_0026
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.931
Esi_0208_0010
Uncharacterized protein.
  
 0.925
Esi_0062_0008
Ribosomal_L18_c domain-containing protein.
  
 
 0.924
Esi_0026_0025
Ribosomal protein L35, isoform CRA_b.
  
 
 0.914
Esi_0073_0071
KH type-2 domain-containing protein.
  
 
 0.913
Esi_0103_0025
Uncharacterized protein.
  
 
 0.910
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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