STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0005_0243IPPc domain-containing protein. (430 aa)    
Predicted Functional Partners:
Esi_0089_0051
Uncharacterized protein.
    
   0.783
Esi_0135_0014
GMP_PDE_delta domain-containing protein.
    
 0.737
Esi_0031_0160
IPPc domain-containing protein.
  
 
0.736
RAC
RAC, RHO family GTPase.
    
 0.701
Esi_0081_0055
Uncharacterized protein.
   
 
 0.696
Esi_0196_0048
Uncharacterized protein.
   
 
 0.669
Esi_0301_0020
Uncharacterized protein.
   
 
 0.669
TIC
CHloroplast inner membrane protein TIC 21.
    
  0.659
Esi_0051_0120
Uncharacterized protein.
    
  0.659
Esi_0117_0024
Ankyrin repeat protein.
    
 0.648
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.