STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0005_0256Uncharacterized protein. (650 aa)    
Predicted Functional Partners:
Esi_0180_0039
RNA binding / nucleic acid binding.
    
 0.746
Esi_0140_0052
RNA-binding protein 1.
    
 0.719
SmE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.716
Esi_0861_0003
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.712
Esi_0304_0006
Poly(Rc) binding protien (Partial).
    
 0.712
SmG
Small nuclear ribonucleoprotein G.
    
 0.711
Esi_0016_0160
annotation not available
   
 0.705
Esi_0018_0017
Proline-rich spliceosome-associated (PSP) family protein.
    
 0.703
SmF
Small nuclear ribonucleoprotein SmF.
    
 0.703
Esi_0058_0037
Spliceosomal protein sap, putative.
    
 0.698
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.