STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0052_0138EsV-1-139. (269 aa)    
Predicted Functional Partners:
Esi_0118_0050
Uncharacterized protein.
  
 0.769
Esi_0002_0096
Exonuclease domain-containing protein.
  
 0.769
Esi_0516_0003
Exonuclease domain-containing protein.
  
 0.769
Esi_0000_0116
Exonuclease domain-containing protein.
  
 0.760
Esi_0080_0004
Exonuclease domain-containing protein.
  
 0.703
Esi_0080_0008
Uncharacterized protein.
  
 0.703
Esi_0302_0026
Uncharacterized protein.
   
    0.482
Esi_0228_0001
3'-5' exonuclease domain-containing protein.
   
 
 0.439
Esi_0006_0068
HRDC domain-containing protein.
   
 
 0.439
Esi_0059_0033
Phosphoesterase, RecJ-like protein.
     
 0.435
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.