STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0056_0022Putative S-adenosylmethionine-dependent methyltransferase. (363 aa)    
Predicted Functional Partners:
Esi_0002_0184
Hypothetical leucine rich repeat protein.
   
   0.659
Pdi3
Protein disulfide-isomerase.
    
 0.613
Pdi6
Protein disulfide isomerase.
    
 0.613
Esi_0454_0014
Thioredoxin domain-containing protein.
    
 0.613
Pdi6-2
Protein disulfide isomerase.
    
 0.613
SBP2
SECIS binding protein 2.
    
 0.613
Pdi5
Protein disulfide-isomerase fusion protein; Belongs to the protein disulfide isomerase family.
    
 0.613
Pdi4
Protein Disulfide Isomerase (Putive Transglutaminase bifunctional protein); Belongs to the protein disulfide isomerase family.
    
 0.613
POX
Proline dehydrogenase.
     
 0.550
Esi_0486_0002
Flagellar associated protein.
   
   0.416
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.