STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0059_0094Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
Esi_0039_0044
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.859
Esi_0130_0021
Uncharacterized protein.
   
 
 0.855
Esi_0038_0015
Uncharacterized protein.
   
 
 0.661
Esi_0515_0003
RAN binding protein 16-like, protein transporter (Partial).
    
   0.570
Esi_0059_0118
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.473
ycf42
Putative peroxiredoxin ycf42.
    
 
 0.463
PRX2
2-cys peroxiredoxin.
    
 
 0.463
Esi_0014_0065
Thioredoxin domain-containing protein.
    
 
 0.443
GPX-5
Glutathione peroxidase.
    
 
 0.443
Esi_0110_0019
Myb-like domain-containing protein.
    
 
 0.423
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.