STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0059_0122Cationic amino acid transporter-like protein. (688 aa)    
Predicted Functional Partners:
Esi_0181_0046
2OG-Fe(II) oxygenase.
  
 0.745
Esi_0081_0103
Fe2OG dioxygenase domain-containing protein.
  
 0.745
Esi_0025_0156
EGF-like domain-containing protein.
    
 0.740
Esi_0499_0007
Uncharacterized protein.
    
 0.689
Esi_0117_0078
Protein tyrosine kinase.
   
  0.658
Esi_0102_0075
ASCH domain-containing protein.
    
  0.613
Esi_0159_0083
Uncharacterized protein.
   
 0.612
GanAB
Alpha-glucosidase II alpha subunit, family GH31; Belongs to the glycosyl hydrolase 31 family.
   
  0.583
Esi_0059_0077
Histone H3; Belongs to the histone H3 family.
   
 0.578
Esi_0033_0106
Histone domain-containing protein.
   
 0.578
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.