STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0070_0114Uncharacterized protein. (983 aa)    
Predicted Functional Partners:
RAC
RAC, RHO family GTPase.
    
  0.538
Rab5
Rab5, RAB family GTPase.
    
 0.520
Rab22
Rab22, RAB family GTPase.
    
 0.520
Rab50
Rab50, RAB family GTPase.
    
 0.520
Esi_0002_0184
Hypothetical leucine rich repeat protein.
    
  0.457
APM4
Clathrin assembly complex, medium subunit; Belongs to the adaptor complexes medium subunit family.
    
 
 0.452
Esi_0045_0029
Uncharacterized protein.
    
 
 0.452
Esi_0094_0092
Uncharacterized protein.
    
 
 0.452
Esi_0097_0073
MIP family channel protein.
    
 
 0.452
CPC17
Coatomer protein complex, gamma sub-unit; Belongs to the adaptor complexes medium subunit family.
    
 
 0.452
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.