STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0081_0073Transmembrane protein, putative. (838 aa)    
Predicted Functional Partners:
Esi_0037_0094
Histone H2B; Belongs to the histone H2B family.
   
 0.979
Esi_0306_0031
Histone H2A; Belongs to the histone H2A family.
   
 0.973
Esi_0002_0151
Similar to MGC81978 protein.
    
 0.971
Esi_0042_0126
Retinoblastoma binding protein 5.
    
 0.958
Esi_0004_0064
B30.2/SPRY domain-containing protein.
    
 0.950
Esi_0107_0021
RPOLD domain-containing protein.
    
 0.936
Esi_0031_0123
Uncharacterized protein.
    
 0.936
Esi_0046_0105
Uncharacterized protein.
    
  0.932
Esi_0196_0052
Uncharacterized protein.
    
  0.932
Esi_0384_0016
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.932
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.