STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Esi_0095_0075Uncharacterized protein. (33 aa)    
Predicted Functional Partners:
Esi_0059_0117
Conserved C2H2 zinc finger protein.
   
 0.972
UBL5
Ubiquitin like protein 5.
    
 0.961
Esi_0347_0006
Uncharacterized protein.
   
 0.960
Esi_0347_0007
MFAP1 domain-containing protein.
   
 0.960
Esi_0244_0001
RED_N domain-containing protein.
   
 0.918
Esi_0037_0013
Similar to splicing factor Prp8.
    
 
 0.897
Esi_0032_0119
Uncharacterized protein.
   
 0.895
Esi_0028_0166
PWI domain-containing protein.
   
 0.883
Esi_0117_0028
Matrin-type domain-containing protein.
   
 0.881
Esi_0011_0042
Uncharacterized protein.
   
 0.860
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.