Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBta_0270 | BBta_0352 | BBta_0270 | BBta_0352 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function; Belongs to the UPF0235 family. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 0.411 |
BBta_0350 | BBta_0352 | BBta_0350 | BBta_0352 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 0.408 |
BBta_0350 | leuD | BBta_0350 | BBta_0351 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.583 |
BBta_0352 | BBta_0270 | BBta_0352 | BBta_0270 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function; Belongs to the UPF0235 family. | 0.411 |
BBta_0352 | BBta_0350 | BBta_0352 | BBta_0350 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 0.408 |
BBta_0352 | BBta_0353 | BBta_0352 | BBta_0353 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | Evidence: Similar to previously reported genes of unknown function. | 0.566 |
BBta_0352 | leuD | BBta_0352 | BBta_0351 | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.592 |
BBta_0353 | BBta_0352 | BBta_0353 | BBta_0352 | Evidence: Similar to previously reported genes of unknown function. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 0.566 |
BBta_0353 | leuD | BBta_0353 | BBta_0351 | Evidence: Similar to previously reported genes of unknown function. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.438 |
leuD | BBta_0350 | BBta_0351 | BBta_0350 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 0.583 |
leuD | BBta_0352 | BBta_0351 | BBta_0352 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. | 0.592 |
leuD | BBta_0353 | BBta_0351 | BBta_0353 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Evidence: Similar to previously reported genes of unknown function. | 0.438 |