STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_0803Hypothetical protein; ICC-like phosphoesterase domain; Evidence: Similar to previously reported genes of unknown function. (227 aa)    
Predicted Functional Partners:
BBta_0802
ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.952
BBta_0798
Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.870
BBta_0799
Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.839
BBta_5369
Hypothetical protein; Sensor histidine kinase domain (HWE family); Evidence: Similar to previously reported genes of unknown function.
  
     0.625
BBta_0982
Hypothetical protein; Histidine kinase domain; Evidence: No homology to any previously reported sequences.
  
     0.611
BBta_1377
Putative HWE histidine kinase family protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.589
BBta_2176
Putative signal transduction histidine kinase; Modular protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.568
BBta_7680
Evidence: Similar to previously reported genes of unknown function.
  
     0.542
BBta_2814
Putative sensor histidine kinase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
     0.518
BBta_7672
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.504
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.