STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_0804Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family. (288 aa)    
Predicted Functional Partners:
BBta_7661
Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family.
  
     0.756
BBta_1272
Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.745
BBta_2094
Putative Transcriptional regulatory protein, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.686
BBta_2111
Putative transcriptional regulatory protein, LysR family; Putative occR-like protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.682
BBta_1510
Transcriptional regulator, LysR family; Evidence: Function of strongly homologous gene; Belongs to the LysR transcriptional regulatory family.
  
     0.671
BBta_4259
Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family.
  
     0.667
BBta_2252
Putative transcriptional regulatory protein, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.663
BBta_0805
Putative permease of the drug/metabolite transporter (DMT) superfamily; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
 
    0.657
BBta_1785
Putative transcriptional regulatory protein, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.569
BBta_6120
Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.551
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.