STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_0807Putative membrane protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane. (308 aa)    
Predicted Functional Partners:
BBta_0806
Evidence: Similar to previously reported genes of unknown function.
 
     0.952
BBta_0039
Hypothetical protein; Universal stress family domain, UspA-like protein; Evidence: Similar to previously reported genes of unknown function; Localization: 2 : Cytoplasmic.
 
   
 0.800
BBta_1766
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.510
BBta_0808
Putative component of multidrug efflux system (RND family); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.456
BBta_0809
HlyD family secretion protein domain; Evidence: Similar to previously reported genes of unknown function; Localization: 7 : Outer membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.456
BBta_0810
Transcriptional regulator domain; Evidence: Similar to previously reported genes of unknown function; Localization: 2 : Cytoplasmic.
       0.456
BBta_2155
Evidence: Similar to previously reported genes of unknown function.
 
  
 0.419
BBta_5410
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.415
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.