STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1007Putative Glycosyl transferase, family 2; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (336 aa)    
Predicted Functional Partners:
BBta_4607
Putative sugar transferase family protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.892
BBta_1004
Putative Glycosyl transferase, group 1 family protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.877
BBta_1005
Putative Glycosyl transferase, group 2 family protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.863
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.833
BBta_1008
Serine O-acetyltransferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.795
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.784
BBta_1049
dTDP-4-dehydrorhamnose 3,5-epimerase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.770
rfbB
dTDP-glucose 4,6-dehydratase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.770
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.746
BBta_1006
Serine O-acetyltransferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.742
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.