STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1352Evidence: Similar to previously reported genes of unknown function. (211 aa)    
Predicted Functional Partners:
BBta_1353
Putative High affinity nickel transporter; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
   
 0.979
dcp
Peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
       0.752
BBta_0827
Invasion protein B domain; Evidence: Similar to previously reported genes of unknown function.
  
     0.641
BBta_0797
Evidence: Similar to previously reported genes of unknown function; Localization: 11 : Membrane.
  
     0.640
BBta_4152
Evidence: Similar to previously reported genes of unknown function.
  
     0.617
BBta_0170
Evidence: Similar to previously reported genes of unknown function.
  
     0.615
BBta_5211
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.612
BBta_0116
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.595
BBta_5236
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.588
BBta_6195
Extensin-like protein domain; Evidence: Similar to previously reported genes of unknown function.
  
     0.587
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.