STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1546Putative heavy metal efflux pump CzcA-like protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1079 aa)    
Predicted Functional Partners:
BBta_1545
Putative heavy metal efflux pump, HlyD family; (CzcB-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.931
BBta_2988
Evidence: Similar to previously reported genes of unknown function; Localization: 11 : Membrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.836
BBta_3470
Putative heavy metal efflux pump, HlyD family; (CzcB-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.834
BBta_6239
Putative cation efflux membrane fusion protein; (CusB-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.822
BBta_3642
Putative Cation efflux system protein cusB precursor; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.813
cusB
Cation efflux system protein cusB precursor; Evidence: Function of strongly homologous gene; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.810
BBta_7182
Putative cation efflux system protein czcB; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PUBMED: 8829543; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.807
BBta_7265
Putative cobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane; PUBMED: 2678100.
 
 
 0.792
BBta_1547
Putative exported protein of unknown function; Evidence: No homology to any previously reported sequences.
       0.741
BBta_7266
Putative outer membrane cobalt-zinc-cadmium resistance protein czcC precursor; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 8 : Outer membrane-associated; PUBMED: 7766206.
 
  
 0.640
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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