STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcEGlycolate oxidase, subunit GlcE; Evidence: Function of homologous gene experimentally demonstrated in an other organism; PUBMED: 9144771. (412 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase subunit, (Fe-S)protein, GlcF; Evidence: Function of homologous gene experimentally demonstrated in an other organism.
 
 
 0.996
glcD
Glycolate oxidase, subunit GlcD; Evidence: Function of homologous gene experimentally demonstrated in an other organism; PUBMED: 9144771.
  
 
0.980
BBta_0073
Putative Glyoxylate reductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 0.926
BBta_0544
Putative Serine--glyoxylate aminotransferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.921
BBta_6719
Catalase, protein srpA precursor; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.921
cbbZ-2
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
 
  
 0.920
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.920
cbbZ
Phosphoglycolate phosphatase; Fragment; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; PUBMED: 9006018.
 
  
 0.919
BBta_5728
Serine-glyoxylate aminotransferase; Evidence: Function of strongly homologous gene.
 
 
 0.919
BBta_5729
Serine-glyoxylate aminotransferase; Evidence: Function of strongly homologous gene.
 
 
 0.919
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.