STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1908Putative ABC transporter, ATP-binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
BBta_1906
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
 
 0.954
BBta_1907
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 6 : Inner membrane-associated.
 
  
 0.950
BBta_2421
Putative ABC spermidine/putrescine transporter permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
 
 0.827
BBta_2892
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
 
 0.814
BBta_1905
Putative ABC transporter substrate-binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.802
BBta_2420
Putative ABC spermidine/putrescine transporter permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
  
 0.800
BBta_7194
Putative ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
 
 0.796
BBta_0497
Putative spermidine/putrescine ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
 
 0.790
BBta_1835
ABC transporter, permease protein; Evidence: Function of strongly homologous gene; Localization: 11 : Membrane.
 
 
 0.780
BBta_6501
Putative ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
 
 0.772
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.