STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1925Putative ABC transporter ATP-binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ABC transporter superfamily. (552 aa)    
Predicted Functional Partners:
BBta_1924
Dipeptide transport system permease protein dppC; Evidence: Function of strongly homologous gene.
  
 0.956
BBta_1923
Putative ABC Transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
 
  
 0.954
BBta_1922
Putative ABC transporter, periplasmic solute-binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.883
BBta_1919
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.728
BBta_1918
2-haloacid halidohydrolase IVa; Evidence: Function of strongly homologous gene.
 
     0.724
BBta_1921
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.722
BBta_1917
Putative oxidoreductase with FAD/NAD(P)-binding domain; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.671
BBta_1915
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
    0.630
BBta_1927
Putative deaminase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.613
BBta_1920
Aminotransferase; Evidence: Function of strongly homologous gene; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.515
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.