STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1978Putative ABC transporter; Permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane. (321 aa)    
Predicted Functional Partners:
BBta_1977
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
  
 0.936
BBta_1976
Putative Oligopeptide/dipeptide ABC transporter protein, ATP binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the ABC transporter superfamily.
 
 
 0.879
BBta_1975
Putative ABC transporter, ATP-binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the ABC transporter superfamily.
 
 0.848
BBta_7556
Putative dipeptide ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 0.844
BBta_2848
ABC transporter permease protein; Putative dipeptide transport protein; Evidence: Function of strongly homologous gene; Localization: 10 : Secreted.
  
 0.843
BBta_4329
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 0.843
BBta_2567
Putative dipeptide transport system permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 0.842
BBta_3715
Putative dipeptide transport protein (ABC superfamily, membrane); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 0.842
BBta_4862
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 0.842
BBta_5136
Putative peptide ABC transporter permease protein, oppC-like protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 0.842
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.