STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_1981Putative acyl-CoA dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (388 aa)    
Predicted Functional Partners:
BBta_1980
Putative FMNH2-dependent aliphatic sulphonate monooxygenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.887
BBta_1982
Putative ABC transporter, periplasmic binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
       0.768
BBta_0817
fadJ/fadB-like; 3-hydroxyacyl-CoA dehydrogenase; enoyl-CoA hydratase/epimerase/isomerase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.747
pimF
3-hydroxyacyl-CoA dehydrogenase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.747
ssuD-5
Putative sulfonate monooxygenase; (SsuD/MsuD-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.711
fixA
Protein fixA; Electron transfer flavoprotein beta-subunit (Beta-ETF); Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
 
 
 0.710
fixB
Protein FixB; Electron transfer flavoprotein alpha chain; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
 
 
 0.707
BBta_4293
Putative Acyl-CoA dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.665
etfB
Electron transfer flavoprotein beta-subunit; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
 
 
 0.654
BBta_4871
Putative ferrodoxin; (AsfB-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.652
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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