STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2016Hypothetical protein; Evidence: Similar to previously reported genes of unknown function. (151 aa)    
Predicted Functional Partners:
BBta_2301
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.826
BBta_2300
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.726
BBta_3936
Hypothetical protein; Rieske iron-sulfur domain; fragment of the domain; Evidence: Similar to previously reported genes of unknown function.
   
 
 0.726
BBta_2018
Putative exported protein of unknown function with cytochrome c domain; Evidence: Similar to previously reported genes of unknown function.
  
 
 0.656
BBta_5608
Putative exported protein of unknown function with nuclear export factor GLE1 domain; Evidence: Similar to previously reported genes of unknown function.
 
     0.655
coxA
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
   0.632
cyoB
Cytochrome bo3 quinol oxidase subunit 1 apoprotein; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein; Belongs to the heme-copper respiratory oxidase family.
  
   0.632
cyoB-2
Cytochrome bb3 quinol oxidase subunit 1 apoprotein; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein; Belongs to the heme-copper respiratory oxidase family.
  
   0.632
cyoA
Cytochrome bo3 quinol oxidase subunit 2; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein.
  
   0.630
cyoA-2
Cytochrome bb3 quinol oxidase subunit 2; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein.
  
   0.630
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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