STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2134Galactose 1-dehydrogenase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic. (308 aa)    
Predicted Functional Partners:
BBta_2135
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.985
BBta_2136
Putative gluconolactonase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.924
BBta_2133
Dihydrodipicolinate synthase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic; Belongs to the DapA family.
 
  
 0.834
BBta_2132
Dihydroxyacid dehydratase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic; Belongs to the IlvD/Edd family.
 
  
 0.827
BBta_2131
Transcriptional regulator, GntR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
   
 0.820
BBta_0487
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the TPP enzyme family.
  
  
 0.799
ytfT
Monosaccharide ABC transporter membrane protein, CUT2 family; Evidence: Function of strongly homologous gene; Localization: 5 : Inner membrane protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
  
    0.788
BBta_2130
Monosaccharide ABC transporter membrane protein, CUT2 family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
  
    0.784
BBta_2128
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TC 3.A.1.2.-.
  
  
 0.779
BBta_6113
4-hydroxyphenylpyruvate dioxygenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
  
 0.723
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.