STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2164Putative amine oxidase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (537 aa)    
Predicted Functional Partners:
BBta_5531
Putative pyridoxal-dependent decarboxylase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
  
 
 0.928
BBta_0261
Hypothetical protein; Amine oxidase domain; Evidence: Similar to previously reported genes of unknown function.
  
  
  0.920
ipdC
Phenylpyruvate decarboxylase; Evidence: Function of homologous gene experimentally demonstrated in an other organism.
  
 
 0.917
BBta_1115
Histamine oxidase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
   
 
 0.915
BBta_1249
Putative Aldehyde dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.905
BBta_1974
NAD-dependent aldehyde dehydrogenase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.905
BBta_2411
Aldehyde dehydrogenase family; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.905
BBta_2831
Aldehyde dehydrogenase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
    
 0.905
BBta_3841
Aldehyde dehydrogenase (acceptor); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.905
BBta_7827
Putative membrane-anchored aldehyde dehydrogenase protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the aldehyde dehydrogenase family.
    
 0.905
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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