STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2423Putative Isoquinoline 1-oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (1181 aa)    
Predicted Functional Partners:
BBta_2424
Putative isoquinoline 1-oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.994
BBta_2301
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.969
BBta_2425
6-hydroxynicotinate reductase; Evidence: Similar to previously reported genes of unknown function.
 
  
  0.954
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.911
BBta_0189
Putative pyrazinamidase/nicotinamidase; Localization: 2 : Cytoplasmic; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.905
pncA
Nicotinamidase/pyrazinamidase; Localization: 2 : Cytoplasmic; Evidence: Function of homologous gene experimentally demonstrated in an other organism.
    
  0.901
BBta_1705
Putative oxidoreductase, GMC family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.815
ccoO
Cytochrome-c oxidase fixO chain; Evidence: Function of strongly homologous gene; Localization: 11 : Membrane.
  
 
 0.762
BBta_2792
Cytochrome c oxidase polypeptide I; Evidence: Function of strongly homologous gene; Localization: 6 : Inner membrane-associated; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.752
BBta_2300
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.751
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.