STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_24256-hydroxynicotinate reductase; Evidence: Similar to previously reported genes of unknown function. (482 aa)    
Predicted Functional Partners:
BBta_2433
Enamidase; Aminohydrolase domain; Evidence: Similar to previously reported genes of unknown function.
 
  
  0.977
BBta_2423
Putative Isoquinoline 1-oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
  0.954
BBta_2424
Putative isoquinoline 1-oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.945
BBta_2426
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.926
BBta_2427
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.903
BBta_2428
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic; TC 3.A.1.4.-.
 
     0.808
BBta_2432
Transcriptional regulator, MarR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
     0.804
BBta_2429
Branched-chain amino acid transport system permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
     0.773
livG
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; TC 3.A.1.4.-.
 
    0.673
livF
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; TC 3.A.1.4.-.
 
     0.578
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.