STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2728Putative amine oxidase (flavin-containing); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (427 aa)    
Predicted Functional Partners:
BBta_2727
Putative 5-amino-6-(5-phosphoribosylamino)uracil reductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.837
BBta_0209
Putative exported protein of unknown function with flavin containing amine oxidoreductase domain; Evidence: Similar to previously reported genes of unknown function.
  
     0.735
BBta_6333
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.680
BBta_2481
Putative deacetylase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.640
aphA
Acetylpolyamine aminohydrolase (Histone deacetylase family); Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic.
   
 0.640
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
    0.575
BBta_1249
Putative Aldehyde dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.528
BBta_1974
NAD-dependent aldehyde dehydrogenase; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.528
BBta_2411
Aldehyde dehydrogenase family; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; Belongs to the aldehyde dehydrogenase family.
    
 0.528
BBta_2939
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, HpcC-like protein; Localization: 2 : Cytoplasmic; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the aldehyde dehydrogenase family.
    
 0.528
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.