STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_2916Putative hydrolase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (277 aa)    
Predicted Functional Partners:
BBta_4559
Hypothetical protein; Methyltransferase domain, FkbM family; Evidence: Similar to previously reported genes of unknown function.
  
     0.763
BBta_5079
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.762
BBta_4169
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.759
BBta_7122
Transcriptional regulator, TetR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
  
     0.725
BBta_4913
Putative signal peptide; Evidence: Similar to previously reported genes of unknown function; Localization: 11 : Membrane.
 
    0.720
BBta_5000
Multi-sensor signal transduction histidine kinase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
     0.704
BBta_6255
Evidence: Similar to previously reported genes of unknown function.
 
   
 0.704
BBta_7496
Hypothetical protein; Glutathione synthetase ATP-binding domain-like protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.692
BBta_0712
Putative sensor histidine kinase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
     0.689
BBta_0785
Evidence: Similar to previously reported genes of unknown function.
  
     0.682
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.