STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_3095Putative cation-efflux pump; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (462 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
    0.781
BBta_3094
Putative two-component sensor histidine kinase with a ATP-binding domain (C-term); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
  
 0.571
BBta_3096
Putative NADPH quinone oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
       0.569
BBta_5331
Putative exported protein of unknown function with calcium-binding domain (EF-hand); Evidence: Similar to previously reported genes of unknown function.
  
    0.527
BBta_3045
Multi-sensor signal transduction histidine kinase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.487
actP
Copper-transporting P-type ATPase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein.
 
 
 0.468
BBta_5509
Putative flagellar basal-body rod protein (flgF or flgG); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic; Belongs to the flagella basal body rod proteins family.
    
 
 0.451
BBta_7254
Putative flagellar basal-body rod protein flgF; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 4 : Flagellar; Belongs to the flagella basal body rod proteins family.
    
 
 0.451
BBta_2464
Evidence: Similar to previously reported genes of unknown function.
 
     0.445
BBta_0399
Evidence: Similar to previously reported genes of unknown function; Localization: 11 : Membrane.
  
     0.441
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.