STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBta_3208Putative nitrilase/cyanide hydratase family protein (carbon-nitrogen hydrolase); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (579 aa)    
Predicted Functional Partners:
BBta_3201
Hypothetical protein; ANTAR domain (AmiR antitermination protein); Evidence: Similar to previously reported genes of unknown function.
 
  
 0.854
BBta_3207
Putative Acetamidase/Formamidase family protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
   
 0.802
BBta_3205
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; TC 3.A.1.4.-.
 
     0.793
BBta_3204
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.774
BBta_3206
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; TC 3.A.1.4.-.
 
     0.732
BBta_3203
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.725
BBta_3202
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TC 3.A.1.4.-.
 
    0.673
BBta_3200
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TC 3.A.1.4.-.
 
    0.583
BBta_1952
Putative aliphatic amidase regulator (AmiR); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.477
BBta_2995
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
  
 0.476
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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