STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuB-2Alkanesulfonate ABC transporter, ATP binding protein; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic. (263 aa)    
Predicted Functional Partners:
BBta_2517
Putative alkanesulfonate ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
  
 0.836
BBta_2515
Putative alkanesulfonate ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
  
 0.835
ssuA-2
Putative alkanesulfonate ABC transporter, substrate binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
  
 0.822
BBta_3307
Putative acyl-CoA dehydrogenase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.818
BBta_3303
Putative alkanesulfonate ABC transporter, substrate binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.795
BBta_2516
Putative alkanesulfonate ABC transporter, substrate binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.785
ssuD-5
Putative sulfonate monooxygenase; (SsuD/MsuD-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.755
BBta_4879
Putative ABC transporter, permease protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 7 : Outer membrane protein.
 
  
 0.701
BBta_5985
Putative ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
  
 0.701
BBta_4890
Putative ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
 
  
 0.696
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.